Well, I don't think it would make much sense. Mudokons don't have much meat on them, and are not considered a universally farmable animal. If anything Mollocks plan was just to keep his factory alive.
Personally I don't think you could dumb down muds. Cows haven't really been dumbed down, they've always been dumb, and have evolved due to selective breeding, rather than anything natural.
Cows these days are completely color blind, have poor vision (which is why they herd), and are mostly meat. They spend their lives happily grazing on lush pastures, following a routine of very basic thought patterns, mostly to identify grass, other cows, and danger. Muds on the other hand, can't be bred. You can't leave a mud in the room with another mud and hope they will eventually get it on. They'll more likely try and bump off one of the gaurds so they can escape.
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