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Looking around now, this has been the major criticism, but it doesn't seemed to have killed it, so perhaps there is something more. Still, cumulative systematic errors in an apparatus and operation the size of a country seems much more likely to me than a violation of physical law.
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Last I heard (which was after the GPS criticism, so I assume they're taking it in to account),
more tests were supporting the faster-than-light analysis.
I'm not widely advertising it though, because it annoys me when people who've never heard of Occam's Razor assume that the entirety of Physics as we know it must be wrong.